Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SP110Q9HB58 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SP110Q9HB58 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SP110Q9HB58 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SP110Q9HB58 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SP110Q9HB58 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SP110Q9HB58 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SP110Q9HB58 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.09■■□□□ 1.29
SP110Q9HB58 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.09■■□□□ 1.29
SP110Q9HB58 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.09■■□□□ 1.29
SP110Q9HB58 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SP110Q9HB58 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SP110Q9HB58 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SP110Q9HB58 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.08■■□□□ 1.29
SP110Q9HB58 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.08■■□□□ 1.29
SP110Q9HB58 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SP110Q9HB58 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.08■■□□□ 1.29
SP110Q9HB58 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SP110Q9HB58 MIR3621-201ENST00000580529 85 ntBASIC23.08■■□□□ 1.29
SP110Q9HB58 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SP110Q9HB58 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SP110Q9HB58 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SP110Q9HB58 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SP110Q9HB58 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.08■■□□□ 1.28
SP110Q9HB58 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SP110Q9HB58 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SP110Q9HB58 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SP110Q9HB58 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.07■■□□□ 1.28
SP110Q9HB58 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.07■■□□□ 1.28
SP110Q9HB58 AC131212.1-201ENST00000613771 668 ntBASIC23.07■■□□□ 1.28
SP110Q9HB58 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SP110Q9HB58 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SP110Q9HB58 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SP110Q9HB58 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SP110Q9HB58 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SP110Q9HB58 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SP110Q9HB58 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SP110Q9HB58 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.06■■□□□ 1.28
SP110Q9HB58 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.06■■□□□ 1.28
SP110Q9HB58 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.06■■□□□ 1.28
SP110Q9HB58 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.06■■□□□ 1.28
SP110Q9HB58 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SP110Q9HB58 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SP110Q9HB58 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SP110Q9HB58 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SP110Q9HB58 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SP110Q9HB58 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SP110Q9HB58 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SP110Q9HB58 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SP110Q9HB58 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.05■■□□□ 1.28
SP110Q9HB58 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.05■■□□□ 1.28
SP110Q9HB58 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SP110Q9HB58 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SP110Q9HB58 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.05■■□□□ 1.28
SP110Q9HB58 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.05■■□□□ 1.28
SP110Q9HB58 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SP110Q9HB58 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SP110Q9HB58 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.05■■□□□ 1.28
SP110Q9HB58 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.04■■□□□ 1.28
SP110Q9HB58 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.04■■□□□ 1.28
SP110Q9HB58 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
SP110Q9HB58 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SP110Q9HB58 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SP110Q9HB58 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SP110Q9HB58 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SP110Q9HB58 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.03■■□□□ 1.28
SP110Q9HB58 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.03■■□□□ 1.28
SP110Q9HB58 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.03■■□□□ 1.28
SP110Q9HB58 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.03■■□□□ 1.28
SP110Q9HB58 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SP110Q9HB58 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SP110Q9HB58 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SP110Q9HB58 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SP110Q9HB58 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.03■■□□□ 1.28
SP110Q9HB58 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.03■■□□□ 1.28
SP110Q9HB58 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SP110Q9HB58 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SP110Q9HB58 AC009102.2-201ENST00000606772 1639 ntBASIC23.02■■□□□ 1.28
SP110Q9HB58 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SP110Q9HB58 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SP110Q9HB58 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.02■■□□□ 1.28
SP110Q9HB58 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.02■■□□□ 1.28
SP110Q9HB58 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SP110Q9HB58 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.02■■□□□ 1.28
SP110Q9HB58 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SP110Q9HB58 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SP110Q9HB58 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms