Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETREG1Q9H6L5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
RETREG1Q9H6L5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 AC144652.1-201ENST00000609974 1624 ntBASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 DUX4L19-201ENST00000557448 1267 ntBASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG1Q9H6L5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG1Q9H6L5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RETREG1Q9H6L5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RETREG1Q9H6L5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG1Q9H6L5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 AL136116.3-201ENST00000402907 1138 ntBASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 DUX4L4-201ENST00000566884 1269 ntBASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG1Q9H6L5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG1Q9H6L5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RETREG1Q9H6L5 AC092068.2-201ENST00000590491 1708 ntBASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RETREG1Q9H6L5 LINC01529-204ENST00000636474 1715 ntBASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 AL138724.1-201ENST00000606771 1088 ntBASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RETREG1Q9H6L5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RETREG1Q9H6L5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG1Q9H6L5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG1Q9H6L5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23■■□□□ 1.27
RETREG1Q9H6L5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RETREG1Q9H6L5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms