Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC008406.3-201ENST00000620001 1374 ntBASIC20.78■□□□□ 0.92
TM9SF2Q99805 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF2Q99805 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF2Q99805 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF2Q99805 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM9SF2Q99805 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.78■□□□□ 0.92
TM9SF2Q99805 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
TM9SF2Q99805 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.77■□□□□ 0.92
TM9SF2Q99805 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.77■□□□□ 0.92
TM9SF2Q99805 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.77■□□□□ 0.92
TM9SF2Q99805 MIR6724-1-201ENST00000616420 92 ntBASIC20.77■□□□□ 0.92
TM9SF2Q99805 MIR6724-2-201ENST00000616483 92 ntBASIC20.77■□□□□ 0.92
TM9SF2Q99805 MIR6724-4-201ENST00000617390 92 ntBASIC20.77■□□□□ 0.92
TM9SF2Q99805 MIR6724-3-201ENST00000622482 92 ntBASIC20.77■□□□□ 0.92
TM9SF2Q99805 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM9SF2Q99805 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TM9SF2Q99805 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM9SF2Q99805 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF2Q99805 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.76■□□□□ 0.91
TM9SF2Q99805 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF2Q99805 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF2Q99805 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF2Q99805 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM9SF2Q99805 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
TM9SF2Q99805 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.75■□□□□ 0.91
TM9SF2Q99805 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TM9SF2Q99805 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
TM9SF2Q99805 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
TM9SF2Q99805 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM9SF2Q99805 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TM9SF2Q99805 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TM9SF2Q99805 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.74■□□□□ 0.91
TM9SF2Q99805 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.74■□□□□ 0.91
TM9SF2Q99805 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TM9SF2Q99805 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM9SF2Q99805 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
TM9SF2Q99805 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.73■□□□□ 0.91
TM9SF2Q99805 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TM9SF2Q99805 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.72■□□□□ 0.91
TM9SF2Q99805 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TM9SF2Q99805 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.72■□□□□ 0.91
TM9SF2Q99805 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.72■□□□□ 0.91
TM9SF2Q99805 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.72■□□□□ 0.91
TM9SF2Q99805 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF2Q99805 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TM9SF2Q99805 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 AL356740.2-201ENST00000601559 647 ntBASIC20.71■□□□□ 0.91
TM9SF2Q99805 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.71■□□□□ 0.91
TM9SF2Q99805 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TM9SF2Q99805 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM9SF2Q99805 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.71■□□□□ 0.91
TM9SF2Q99805 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.71■□□□□ 0.91
TM9SF2Q99805 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TM9SF2Q99805 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.7■□□□□ 0.91
TM9SF2Q99805 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF2Q99805 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF2Q99805 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF2Q99805 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF2Q99805 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.7■□□□□ 0.9
TM9SF2Q99805 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms