Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LYSMD1Q96S90 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LYSMD1Q96S90 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.57■■□□□ 1.2
LYSMD1Q96S90 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LYSMD1Q96S90 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD1Q96S90 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.54■■□□□ 1.2
LYSMD1Q96S90 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD1Q96S90 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD1Q96S90 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD1Q96S90 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.53■■□□□ 1.2
LYSMD1Q96S90 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD1Q96S90 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.52■■□□□ 1.2
LYSMD1Q96S90 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
LYSMD1Q96S90 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.52■■□□□ 1.2
LYSMD1Q96S90 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LYSMD1Q96S90 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.52■■□□□ 1.2
LYSMD1Q96S90 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
LYSMD1Q96S90 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 SRD5A1P1-201ENST00000442297 786 ntBASIC22.51■■□□□ 1.19
LYSMD1Q96S90 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.51■■□□□ 1.19
LYSMD1Q96S90 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD1Q96S90 AC008406.3-201ENST00000620001 1374 ntBASIC22.5■■□□□ 1.19
LYSMD1Q96S90 FP325331.1-202ENST00000623531 1380 ntBASIC22.5■■□□□ 1.19
LYSMD1Q96S90 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 AC144652.1-201ENST00000609974 1624 ntBASIC22.5■■□□□ 1.19
LYSMD1Q96S90 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 AL136116.3-201ENST00000402907 1138 ntBASIC22.5■■□□□ 1.19
LYSMD1Q96S90 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
LYSMD1Q96S90 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.49■■□□□ 1.19
LYSMD1Q96S90 AC241377.3-202ENST00000626088 1088 ntBASIC22.49■■□□□ 1.19
LYSMD1Q96S90 AC241585.3-202ENST00000628937 1088 ntBASIC22.49■■□□□ 1.19
LYSMD1Q96S90 AC245100.8-202ENST00000629247 1058 ntBASIC22.49■■□□□ 1.19
LYSMD1Q96S90 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LYSMD1Q96S90 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 AC092068.2-201ENST00000590491 1708 ntBASIC22.48■■□□□ 1.19
LYSMD1Q96S90 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
LYSMD1Q96S90 AC079630.1-202ENST00000618127 1840 ntBASIC22.47■■□□□ 1.19
LYSMD1Q96S90 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.47■■□□□ 1.19
LYSMD1Q96S90 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LYSMD1Q96S90 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms