Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.83■□□□□ 0.6
CLCC1Q96S66 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLCC1Q96S66 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 MIR6089-201ENST00000616698 64 ntBASIC18.82■□□□□ 0.6
CLCC1Q96S66 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCC1Q96S66 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLCC1Q96S66 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 FOXO3B-201ENST00000395675 1928 ntBASIC18.81■□□□□ 0.6
CLCC1Q96S66 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCC1Q96S66 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCC1Q96S66 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CLCC1Q96S66 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLCC1Q96S66 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCC1Q96S66 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCC1Q96S66 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLCC1Q96S66 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCC1Q96S66 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLCC1Q96S66 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLCC1Q96S66 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCC1Q96S66 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 AC139795.1-202ENST00000500444 432 ntBASIC18.79■□□□□ 0.6
CLCC1Q96S66 BHLHE23-202ENST00000612929 1109 ntBASIC18.79■□□□□ 0.6
CLCC1Q96S66 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCC1Q96S66 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLCC1Q96S66 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCC1Q96S66 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCC1Q96S66 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCC1Q96S66 EP400NL-214ENST00000641289 2402 ntBASIC18.78■□□□□ 0.6
CLCC1Q96S66 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCC1Q96S66 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCC1Q96S66 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCC1Q96S66 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCC1Q96S66 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCC1Q96S66 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCC1Q96S66 C1orf229-201ENST00000623686 2258 ntBASIC18.77■□□□□ 0.6
CLCC1Q96S66 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.77■□□□□ 0.6
CLCC1Q96S66 AC004987.1-201ENST00000428627 508 ntBASIC18.77■□□□□ 0.6
CLCC1Q96S66 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCC1Q96S66 AC087393.1-201ENST00000582896 145 ntBASIC18.77■□□□□ 0.6
CLCC1Q96S66 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCC1Q96S66 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCC1Q96S66 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCC1Q96S66 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLCC1Q96S66 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CLCC1Q96S66 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms