Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CASD1Q96PB1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
CASD1Q96PB1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CASD1Q96PB1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CASD1Q96PB1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.36■■□□□ 1.49
CASD1Q96PB1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CASD1Q96PB1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.36■■□□□ 1.49
CASD1Q96PB1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CASD1Q96PB1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASD1Q96PB1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASD1Q96PB1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.35■■□□□ 1.49
CASD1Q96PB1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASD1Q96PB1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.35■■□□□ 1.49
CASD1Q96PB1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.35■■□□□ 1.49
CASD1Q96PB1 AC135731.1-201ENST00000569415 2548 ntBASIC24.35■■□□□ 1.49
CASD1Q96PB1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASD1Q96PB1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.34■■□□□ 1.49
CASD1Q96PB1 AP003733.4-201ENST00000623785 1697 ntBASIC24.34■■□□□ 1.49
CASD1Q96PB1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.34■■□□□ 1.49
CASD1Q96PB1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.34■■□□□ 1.49
CASD1Q96PB1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASD1Q96PB1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CASD1Q96PB1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.34■■□□□ 1.49
CASD1Q96PB1 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.34■■□□□ 1.49
CASD1Q96PB1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASD1Q96PB1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CASD1Q96PB1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASD1Q96PB1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASD1Q96PB1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.33■■□□□ 1.49
CASD1Q96PB1 AC126544.1-201ENST00000580842 1059 ntBASIC24.33■■□□□ 1.49
CASD1Q96PB1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASD1Q96PB1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CASD1Q96PB1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CASD1Q96PB1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.32■■□□□ 1.48
CASD1Q96PB1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASD1Q96PB1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASD1Q96PB1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.32■■□□□ 1.48
CASD1Q96PB1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASD1Q96PB1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.32■■□□□ 1.48
CASD1Q96PB1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASD1Q96PB1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASD1Q96PB1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CASD1Q96PB1 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.31■■□□□ 1.48
CASD1Q96PB1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.31■■□□□ 1.48
CASD1Q96PB1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CASD1Q96PB1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CASD1Q96PB1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASD1Q96PB1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.3■■□□□ 1.48
CASD1Q96PB1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CASD1Q96PB1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASD1Q96PB1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASD1Q96PB1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CASD1Q96PB1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.3■■□□□ 1.48
CASD1Q96PB1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CASD1Q96PB1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.29■■□□□ 1.48
CASD1Q96PB1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CASD1Q96PB1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CASD1Q96PB1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.29■■□□□ 1.48
CASD1Q96PB1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CASD1Q96PB1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CASD1Q96PB1 TSPY26P-201ENST00000476365 1326 ntBASIC24.29■■□□□ 1.48
CASD1Q96PB1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASD1Q96PB1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASD1Q96PB1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASD1Q96PB1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASD1Q96PB1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.28■■□□□ 1.48
CASD1Q96PB1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CASD1Q96PB1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.27■■□□□ 1.48
CASD1Q96PB1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CASD1Q96PB1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CASD1Q96PB1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CASD1Q96PB1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CASD1Q96PB1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CASD1Q96PB1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.26■■□□□ 1.47
CASD1Q96PB1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
CASD1Q96PB1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.25■■□□□ 1.47
CASD1Q96PB1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CASD1Q96PB1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CASD1Q96PB1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms