Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20■□□□□ 0.79
APH1AQ96BI3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
APH1AQ96BI3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APH1AQ96BI3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.99■□□□□ 0.79
APH1AQ96BI3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APH1AQ96BI3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.99■□□□□ 0.79
APH1AQ96BI3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APH1AQ96BI3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APH1AQ96BI3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APH1AQ96BI3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
APH1AQ96BI3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
APH1AQ96BI3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.98■□□□□ 0.79
APH1AQ96BI3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APH1AQ96BI3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APH1AQ96BI3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
APH1AQ96BI3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.97■□□□□ 0.79
APH1AQ96BI3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
APH1AQ96BI3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.97■□□□□ 0.79
APH1AQ96BI3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APH1AQ96BI3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.97■□□□□ 0.79
APH1AQ96BI3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APH1AQ96BI3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.96■□□□□ 0.79
APH1AQ96BI3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APH1AQ96BI3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.95■□□□□ 0.79
APH1AQ96BI3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
APH1AQ96BI3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
APH1AQ96BI3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.95■□□□□ 0.78
APH1AQ96BI3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
APH1AQ96BI3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
APH1AQ96BI3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APH1AQ96BI3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.95■□□□□ 0.78
APH1AQ96BI3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APH1AQ96BI3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
APH1AQ96BI3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 AC093323.1-202ENST00000635031 2045 ntBASIC19.94■□□□□ 0.78
APH1AQ96BI3 C17orf82-201ENST00000623772 1530 ntBASIC19.94■□□□□ 0.78
APH1AQ96BI3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.94■□□□□ 0.78
APH1AQ96BI3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.94■□□□□ 0.78
APH1AQ96BI3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
APH1AQ96BI3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
APH1AQ96BI3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.93■□□□□ 0.78
APH1AQ96BI3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
APH1AQ96BI3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.93■□□□□ 0.78
APH1AQ96BI3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.93■□□□□ 0.78
APH1AQ96BI3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APH1AQ96BI3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
APH1AQ96BI3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.92■□□□□ 0.78
APH1AQ96BI3 AC092171.4-201ENST00000609130 632 ntBASIC19.92■□□□□ 0.78
APH1AQ96BI3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.92■□□□□ 0.78
APH1AQ96BI3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
APH1AQ96BI3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.92■□□□□ 0.78
APH1AQ96BI3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
APH1AQ96BI3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APH1AQ96BI3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
APH1AQ96BI3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
APH1AQ96BI3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APH1AQ96BI3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
APH1AQ96BI3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
APH1AQ96BI3 AC241377.3-202ENST00000626088 1088 ntBASIC19.91■□□□□ 0.78
APH1AQ96BI3 AC241585.3-202ENST00000628937 1088 ntBASIC19.91■□□□□ 0.78
APH1AQ96BI3 AC245100.8-202ENST00000629247 1058 ntBASIC19.91■□□□□ 0.78
APH1AQ96BI3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APH1AQ96BI3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APH1AQ96BI3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.9■□□□□ 0.78
APH1AQ96BI3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.9■□□□□ 0.78
APH1AQ96BI3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms