Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.82■□□□□ 0.76
RPS4Y2Q8TD47 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 DUX4L9-201ENST00000449051 1259 ntBASIC19.81■□□□□ 0.76
RPS4Y2Q8TD47 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPS4Y2Q8TD47 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 AC242852.2-201ENST00000615738 1807 ntBASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 NTF6A-201ENST00000591175 560 ntBASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPS4Y2Q8TD47 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RPS4Y2Q8TD47 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS4Y2Q8TD47 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
RPS4Y2Q8TD47 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 AC079630.1-202ENST00000618127 1840 ntBASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4Y2Q8TD47 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y2Q8TD47 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y2Q8TD47 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms