Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRC3Q7RTR2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.63■□□□□ 0.73
NLRC3Q7RTR2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NLRC3Q7RTR2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
NLRC3Q7RTR2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 AC007375.3-201ENST00000600936 2314 ntBASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 AC120024.1-201ENST00000562672 995 ntBASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NLRC3Q7RTR2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
NLRC3Q7RTR2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 LINC00526-201ENST00000581067 1875 ntBASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.6■□□□□ 0.73
NLRC3Q7RTR2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 BX664725.1-201ENST00000438252 379 ntBASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.59■□□□□ 0.73
NLRC3Q7RTR2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
NLRC3Q7RTR2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NLRC3Q7RTR2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 KRT125P-201ENST00000546827 989 ntBASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 Z92544.1-202ENST00000571933 1220 ntBASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
NLRC3Q7RTR2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 AC127496.7-201ENST00000625110 1798 ntBASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC3Q7RTR2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms