Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 MIR6089-201ENST00000616698 64 ntBASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM53Q6P2H8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 MIR4508-201ENST00000584178 70 ntBASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TMEM53Q6P2H8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 KRT8P33-201ENST00000508125 1423 ntBASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 AP003733.4-201ENST00000623785 1697 ntBASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 LINC01124-201ENST00000409786 2117 ntBASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TMEM53Q6P2H8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 AC011551.1-201ENST00000614101 683 ntBASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMEM53Q6P2H8 AF106564.1-201ENST00000607058 2553 ntBASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 AC137767.1-201ENST00000602918 1920 ntBASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 AC090877.2-201ENST00000558441 1738 ntBASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
TMEM53Q6P2H8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEM53Q6P2H8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM53Q6P2H8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 THA1P-201ENST00000590384 1145 ntBASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM53Q6P2H8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEM53Q6P2H8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.39■□□□□ 0.86
TMEM53Q6P2H8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms