Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYPL1Q16563 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYPL1Q16563 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYPL1Q16563 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYPL1Q16563 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.03■□□□□ 0.96
SYPL1Q16563 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYPL1Q16563 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYPL1Q16563 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.03■□□□□ 0.96
SYPL1Q16563 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.02■□□□□ 0.96
SYPL1Q16563 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SYPL1Q16563 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SYPL1Q16563 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SYPL1Q16563 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYPL1Q16563 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SYPL1Q16563 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.01■□□□□ 0.95
SYPL1Q16563 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.01■□□□□ 0.95
SYPL1Q16563 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYPL1Q16563 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21■□□□□ 0.95
SYPL1Q16563 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SYPL1Q16563 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21■□□□□ 0.95
SYPL1Q16563 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SYPL1Q16563 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYPL1Q16563 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.99■□□□□ 0.95
SYPL1Q16563 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.99■□□□□ 0.95
SYPL1Q16563 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.99■□□□□ 0.95
SYPL1Q16563 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYPL1Q16563 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SYPL1Q16563 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.99■□□□□ 0.95
SYPL1Q16563 AL031848.2-201ENST00000607670 837 ntBASIC20.99■□□□□ 0.95
SYPL1Q16563 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.99■□□□□ 0.95
SYPL1Q16563 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYPL1Q16563 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.99■□□□□ 0.95
SYPL1Q16563 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SYPL1Q16563 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYPL1Q16563 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYPL1Q16563 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.98■□□□□ 0.95
SYPL1Q16563 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYPL1Q16563 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYPL1Q16563 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYPL1Q16563 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.98■□□□□ 0.95
SYPL1Q16563 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYPL1Q16563 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
SYPL1Q16563 SNX5-217ENST00000606557 1087 ntBASIC20.98■□□□□ 0.95
SYPL1Q16563 AC137630.3-201ENST00000607245 391 ntBASIC20.98■□□□□ 0.95
SYPL1Q16563 AC079630.1-202ENST00000618127 1840 ntBASIC20.98■□□□□ 0.95
SYPL1Q16563 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
SYPL1Q16563 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYPL1Q16563 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
SYPL1Q16563 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
SYPL1Q16563 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SYPL1Q16563 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.97■□□□□ 0.95
SYPL1Q16563 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.97■□□□□ 0.95
SYPL1Q16563 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
SYPL1Q16563 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYPL1Q16563 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYPL1Q16563 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SYPL1Q16563 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SYPL1Q16563 C1orf229-201ENST00000623686 2258 ntBASIC20.96■□□□□ 0.95
SYPL1Q16563 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.96■□□□□ 0.95
SYPL1Q16563 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.96■□□□□ 0.95
SYPL1Q16563 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.96■□□□□ 0.95
SYPL1Q16563 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.96■□□□□ 0.95
SYPL1Q16563 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYPL1Q16563 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SYPL1Q16563 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SYPL1Q16563 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYPL1Q16563 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.95■□□□□ 0.94
SYPL1Q16563 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYPL1Q16563 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms