Protein–RNA interactions for Protein: P69905

HBA1, Hemoglobin subunit alpha, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1P69905 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HBA1P69905 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HBA1P69905 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.3■■□□□ 1
HBA1P69905 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
HBA1P69905 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
HBA1P69905 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.29■■□□□ 1
HBA1P69905 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.29■■□□□ 1
HBA1P69905 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HBA1P69905 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HBA1P69905 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HBA1P69905 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
HBA1P69905 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.28■■□□□ 1
HBA1P69905 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HBA1P69905 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HBA1P69905 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
HBA1P69905 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HBA1P69905 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HBA1P69905 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.26■□□□□ 0.99
HBA1P69905 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
HBA1P69905 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.26■□□□□ 0.99
HBA1P69905 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.26■□□□□ 0.99
HBA1P69905 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 C1orf229-201ENST00000623686 2258 ntBASIC21.26■□□□□ 0.99
HBA1P69905 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.26■□□□□ 0.99
HBA1P69905 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HBA1P69905 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HBA1P69905 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HBA1P69905 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
HBA1P69905 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.25■□□□□ 0.99
HBA1P69905 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.25■□□□□ 0.99
HBA1P69905 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HBA1P69905 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
HBA1P69905 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HBA1P69905 AC079630.1-202ENST00000618127 1840 ntBASIC21.25■□□□□ 0.99
HBA1P69905 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
HBA1P69905 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HBA1P69905 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.24■□□□□ 0.99
HBA1P69905 SNX5-217ENST00000606557 1087 ntBASIC21.24■□□□□ 0.99
HBA1P69905 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.24■□□□□ 0.99
HBA1P69905 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
HBA1P69905 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.24■□□□□ 0.99
HBA1P69905 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HBA1P69905 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HBA1P69905 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
HBA1P69905 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
HBA1P69905 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.23■□□□□ 0.99
HBA1P69905 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.23■□□□□ 0.99
HBA1P69905 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.23■□□□□ 0.99
HBA1P69905 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.23■□□□□ 0.99
HBA1P69905 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.23■□□□□ 0.99
HBA1P69905 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.23■□□□□ 0.99
HBA1P69905 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.23■□□□□ 0.99
HBA1P69905 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HBA1P69905 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HBA1P69905 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HBA1P69905 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.22■□□□□ 0.99
HBA1P69905 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HBA1P69905 AC137630.3-201ENST00000607245 391 ntBASIC21.22■□□□□ 0.99
HBA1P69905 AL031848.2-201ENST00000607670 837 ntBASIC21.22■□□□□ 0.99
HBA1P69905 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HBA1P69905 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HBA1P69905 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HBA1P69905 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HBA1P69905 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.21■□□□□ 0.99
HBA1P69905 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HBA1P69905 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HBA1P69905 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.21■□□□□ 0.99
HBA1P69905 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms