Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ACADVL-217ENST00000579286 933 ntTSL 320.9■□□□□ 0.944e-10■■■■□ 23.5
NCBP2P52298 ACADVL-233ENST00000583312 799 ntTSL 320.9■□□□□ 0.944e-10■■■■□ 23.5
NCBP2P52298 ACADVL-238ENST00000584103 555 ntTSL 420.06■□□□□ 0.84e-10■■■■□ 23.5
NCBP2P52298 ACADVL-221ENST00000579886 502 ntTSL 518.98■□□□□ 0.634e-10■■■■□ 23.5
NCBP2P52298 ACADVL-227ENST00000582056 738 ntTSL 218.26■□□□□ 0.514e-10■■■■□ 23.5
NCBP2P52298 FAM222B-203ENST00000577376 720 ntTSL 223.64■■□□□ 1.373e-6■■■■□ 23.5
NCBP2P52298 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.24■■□□□ 1.153e-6■■■■□ 23.5
NCBP2P52298 ATF7IP2-209ENST00000562396 1681 nt21.22■□□□□ 0.994e-9■■■■□ 23.5
NCBP2P52298 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.853e-6■■■■□ 23.5
NCBP2P52298 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.63■□□□□ 0.733e-6■■■■□ 23.5
NCBP2P52298 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.43■□□□□ 0.73e-6■■■■□ 23.5
NCBP2P52298 FAM222B-206ENST00000579381 462 ntTSL 519.43■□□□□ 0.73e-6■■■■□ 23.5
NCBP2P52298 CASP8AP2-203ENST00000547893 2003 ntTSL 519.13■□□□□ 0.651e-10■■■■□ 23.5
NCBP2P52298 FAM222B-207ENST00000581229 598 ntTSL 418.37■□□□□ 0.533e-6■■■■□ 23.5
NCBP2P52298 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.163e-6■■■■□ 23.5
NCBP2P52298 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.97■□□□□ 0.153e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-207ENST00000578134 831 ntTSL 315.92■□□□□ 0.147e-7■■■■□ 23.5
NCBP2P52298 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.123e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-215ENST00000579780 611 ntTSL 315.7■□□□□ 0.16e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-228ENST00000583363 558 ntTSL 415.32■□□□□ 0.046e-7■■■■□ 23.5
NCBP2P52298 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■■■■□ 23.5
NCBP2P52298 SF3A2-203ENST00000587637 501 ntTSL 215.16■□□□□ 0.023e-6■■■■□ 23.5
NCBP2P52298 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.023e-6■■■■□ 23.5
NCBP2P52298 ATF7IP2-216ENST00000569900 559 ntTSL 415.1■□□□□ 0.014e-9■■■■□ 23.5
NCBP2P52298 CDK5RAP3-206ENST00000578018 567 ntTSL 215.07■□□□□ 06e-7■■■■□ 23.5
NCBP2P52298 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.043e-6■■■■□ 23.5
NCBP2P52298 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.093e-6■■■■□ 23.5
NCBP2P52298 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.13e-6■■■■□ 23.5
NCBP2P52298 SPTBN2-202ENST00000527010 859 ntTSL 214.22□□□□□ -0.133e-6■■■■□ 23.5
NCBP2P52298 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.143e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-218ENST00000580391 1957 ntTSL 514.02□□□□□ -0.168e-7■■■■□ 23.5
NCBP2P52298 CASP8AP2-202ENST00000419040 1280 ntTSL 214.02□□□□□ -0.171e-10■■■■□ 23.5
NCBP2P52298 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.186e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-236ENST00000584991 1862 ntTSL 513.91□□□□□ -0.186e-7■■■■□ 23.5
NCBP2P52298 CASP8AP2-204ENST00000548224 1300 ntTSL 513.86□□□□□ -0.191e-10■■■■□ 23.5
NCBP2P52298 ATF7IP2-207ENST00000561932 538 ntTSL 413.79□□□□□ -0.24e-9■■■■□ 23.5
NCBP2P52298 SF3A2-202ENST00000586396 543 ntAPPRIS ALT2 TSL 313.53□□□□□ -0.243e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)13.37□□□□□ -0.277e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-226ENST00000583182 709 ntTSL 313.19□□□□□ -0.36e-7■■■■□ 23.5
NCBP2P52298 SF3A2-206ENST00000592314 885 ntTSL 513.18□□□□□ -0.33e-6■■■■□ 23.5
NCBP2P52298 RABGAP1L-209ENST00000457696 1847 ntTSL 1 (best)12.86□□□□□ -0.353e-6■■■■□ 23.5
NCBP2P52298 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.393e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-233ENST00000584186 482 ntTSL 312.45□□□□□ -0.428e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-234ENST00000584525 530 ntTSL 412.05□□□□□ -0.486e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.03□□□□□ -0.486e-7■■■■□ 23.5
NCBP2P52298 AC018521.1-202ENST00000641877 2655 ntBASIC11.9□□□□□ -0.56e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)11.9□□□□□ -0.517e-7■■■■□ 23.5
NCBP2P52298 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.521e-10■■■■□ 23.5
NCBP2P52298 CDK5RAP3-203ENST00000577442 617 ntTSL 411.79□□□□□ -0.526e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-222ENST00000581708 543 ntTSL 411.51□□□□□ -0.575e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-213ENST00000579605 560 ntTSL 411.49□□□□□ -0.575e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-212ENST00000579175 867 ntTSL 311.29□□□□□ -0.67e-7■■■■□ 23.5
NCBP2P52298 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.623e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-216ENST00000579853 714 ntTSL 410.82□□□□□ -0.686e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)10.71□□□□□ -0.696e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-210ENST00000578733 578 ntTSL 210.56□□□□□ -0.726e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-204ENST00000577664 568 ntTSL 410.37□□□□□ -0.756e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-235ENST00000584592 372 ntTSL 510.37□□□□□ -0.756e-7■■■■□ 23.5
NCBP2P52298 RABGAP1L-222ENST00000635248 3074 ntTSL 510.12□□□□□ -0.793e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-214ENST00000579632 738 ntTSL 49.89□□□□□ -0.835e-7■■■■□ 23.5
NCBP2P52298 ATF7IP2-205ENST00000535850 1907 ntTSL 29.58□□□□□ -0.884e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-210ENST00000562527 625 ntTSL 39.58□□□□□ -0.884e-9■■■■□ 23.5
NCBP2P52298 FAM222B-212ENST00000583307 886 ntTSL 29.28□□□□□ -0.923e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-208ENST00000578525 564 ntTSL 48.84□□□□□ -0.996e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-227ENST00000583352 901 ntTSL 38.72□□□□□ -1.017e-7■■■■□ 23.5
NCBP2P52298 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.72□□□□□ -1.013e-6■■■■□ 23.5
NCBP2P52298 AC018521.1-201ENST00000582262 575 ntTSL 48.71□□□□□ -1.026e-7■■■■□ 23.5
NCBP2P52298 CDK5RAP3-220ENST00000581160 490 ntTSL 38.58□□□□□ -1.046e-7■■■■□ 23.5
NCBP2P52298 FAM222B-204ENST00000577513 731 ntTSL 38.29□□□□□ -1.083e-6■■■■□ 23.5
NCBP2P52298 CDK5RAP3-224ENST00000582275 442 ntTSL 57.62□□□□□ -1.196e-7■■■■□ 23.5
NCBP2P52298 CASP8AP2-201ENST00000237177 6719 ntTSL 57.46□□□□□ -1.221e-10■■■■□ 23.5
NCBP2P52298 ATF7IP2-217ENST00000569939 564 ntTSL 47.06□□□□□ -1.284e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.4□□□□□ -1.394e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.484e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-208ENST00000562102 558 ntTSL 44.2□□□□□ -1.744e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-211ENST00000564797 450 ntTSL 33.96□□□□□ -1.784e-9■■■■□ 23.5
NCBP2P52298 CASP8AP2-206ENST00000552401 1153 ntTSL 1 (best)3.68□□□□□ -1.821e-10■■■■□ 23.5
NCBP2P52298 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.8□□□□□ -1.964e-9■■■■□ 23.5
NCBP2P52298 ATF7IP2-214ENST00000566316 576 ntTSL 20.55□□□□□ -2.324e-9■■■■□ 23.5
NCBP2P52298 RNA5SP215-201ENST00000363440 122 ntBASIC-1.63□□□□□ -2.673e-6■■■■□ 23.5
NCBP2P52298 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.91■■■□□ 2.224e-10■■■■□ 23.4
NCBP2P52298 CGREF1-207ENST00000440612 1695 ntTSL 326.29■■□□□ 1.89e-7■■■■□ 23.4
NCBP2P52298 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.769e-7■■■■□ 23.4
NCBP2P52298 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.689e-7■■■■□ 23.4
NCBP2P52298 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.46■■□□□ 1.679e-7■■■■□ 23.4
NCBP2P52298 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.639e-7■■■■□ 23.4
NCBP2P52298 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.13■■□□□ 1.619e-7■■■■□ 23.4
NCBP2P52298 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.99■■□□□ 1.599e-7■■■■□ 23.4
NCBP2P52298 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.68■■□□□ 1.549e-7■■■■□ 23.4
NCBP2P52298 MGAT5-204ENST00000481801 651 ntTSL 322.94■■□□□ 1.265e-7■■■■□ 23.4
NCBP2P52298 MGAT5-203ENST00000468758 816 ntTSL 522.94■■□□□ 1.265e-7■■■■□ 23.4
NCBP2P52298 PTMA-206ENST00000412128 863 ntTSL 322.39■■□□□ 1.179e-7■■■■□ 23.4
NCBP2P52298 TPCN2-203ENST00000534832 435 ntTSL 222.01■■□□□ 1.119e-13■■■■□ 23.4
NCBP2P52298 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.43■□□□□ 0.869e-7■■■■□ 23.4
NCBP2P52298 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.759e-7■■■■□ 23.4
NCBP2P52298 ARHGAP11B-207ENST00000567449 1126 ntTSL 1 (best)19.6■□□□□ 0.739e-7■■■■□ 23.4
NCBP2P52298 FARP1-231ENST00000600648 433 ntTSL 519.59■□□□□ 0.739e-7■■■■□ 23.4
NCBP2P52298 MSH5-215ENST00000482280 944 ntTSL 218.23■□□□□ 0.519e-7■■■■□ 23.4
NCBP2P52298 MSH5-210ENST00000463094 796 ntTSL 218.23■□□□□ 0.519e-7■■■■□ 23.4
NCBP2P52298 GALK1-208ENST00000592494 1121 ntTSL 518.05■□□□□ 0.489e-7■■■■□ 23.4
Retrieved 100 of 18,329 protein–RNA pairs in 193.1 ms