Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
MECP2P51608 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.22■□□□□ 0.67
MECP2P51608 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 ESRRAP2-201ENST00000418437 1549 ntBASIC19.22■□□□□ 0.67
MECP2P51608 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MECP2P51608 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.22■□□□□ 0.67
MECP2P51608 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MECP2P51608 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MECP2P51608 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MECP2P51608 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MECP2P51608 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MECP2P51608 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.21■□□□□ 0.67
MECP2P51608 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MECP2P51608 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MECP2P51608 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MECP2P51608 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MECP2P51608 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
MECP2P51608 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MECP2P51608 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MECP2P51608 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MECP2P51608 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.2■□□□□ 0.66
MECP2P51608 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.2■□□□□ 0.66
MECP2P51608 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.2■□□□□ 0.66
MECP2P51608 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MECP2P51608 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
MECP2P51608 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.2■□□□□ 0.66
MECP2P51608 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.2■□□□□ 0.66
MECP2P51608 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.2■□□□□ 0.66
MECP2P51608 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MECP2P51608 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
MECP2P51608 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.19■□□□□ 0.66
MECP2P51608 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.19■□□□□ 0.66
MECP2P51608 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MECP2P51608 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MECP2P51608 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
MECP2P51608 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MECP2P51608 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MECP2P51608 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
MECP2P51608 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.18■□□□□ 0.66
MECP2P51608 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.18■□□□□ 0.66
MECP2P51608 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.18■□□□□ 0.66
MECP2P51608 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MECP2P51608 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MECP2P51608 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MECP2P51608 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
MECP2P51608 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MECP2P51608 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.16■□□□□ 0.66
MECP2P51608 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.16■□□□□ 0.66
MECP2P51608 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.16■□□□□ 0.66
MECP2P51608 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MECP2P51608 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MECP2P51608 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MECP2P51608 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
MECP2P51608 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.15■□□□□ 0.66
MECP2P51608 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.15■□□□□ 0.66
MECP2P51608 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.15■□□□□ 0.66
MECP2P51608 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.15■□□□□ 0.66
MECP2P51608 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MECP2P51608 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.15■□□□□ 0.66
MECP2P51608 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MECP2P51608 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MECP2P51608 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.14■□□□□ 0.66
MECP2P51608 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MECP2P51608 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms