Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A3P43003 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A3P43003 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC1A3P43003 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC1A3P43003 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
SLC1A3P43003 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A3P43003 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A3P43003 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.71■□□□□ 0.91
SLC1A3P43003 Z92544.1-202ENST00000571933 1220 ntBASIC20.71■□□□□ 0.91
SLC1A3P43003 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A3P43003 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A3P43003 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A3P43003 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC1A3P43003 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SLC1A3P43003 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC1A3P43003 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A3P43003 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A3P43003 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC1A3P43003 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A3P43003 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC1A3P43003 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC1A3P43003 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A3P43003 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A3P43003 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SLC1A3P43003 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A3P43003 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A3P43003 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC1A3P43003 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.69■□□□□ 0.9
SLC1A3P43003 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A3P43003 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A3P43003 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLC1A3P43003 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A3P43003 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A3P43003 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A3P43003 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A3P43003 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A3P43003 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC1A3P43003 KRT125P-201ENST00000546827 989 ntBASIC20.68■□□□□ 0.9
SLC1A3P43003 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A3P43003 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC1A3P43003 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A3P43003 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SLC1A3P43003 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC1A3P43003 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC1A3P43003 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC1A3P43003 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC1A3P43003 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC1A3P43003 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC1A3P43003 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC1A3P43003 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 AL451085.2-201ENST00000605085 799 ntBASIC20.66■□□□□ 0.9
SLC1A3P43003 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC1A3P43003 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 AL117328.2-201ENST00000624617 1940 ntBASIC20.66■□□□□ 0.9
SLC1A3P43003 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC1A3P43003 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC1A3P43003 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC1A3P43003 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC1A3P43003 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A3P43003 AC009299.2-201ENST00000482477 511 ntBASIC20.65■□□□□ 0.9
SLC1A3P43003 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC1A3P43003 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC1A3P43003 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC1A3P43003 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC1A3P43003 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms