Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHRNB4P30926 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHRNB4P30926 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHRNB4P30926 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CHRNB4P30926 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 AC126544.1-201ENST00000580842 1059 ntBASIC19.99■□□□□ 0.79
CHRNB4P30926 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.99■□□□□ 0.79
CHRNB4P30926 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHRNB4P30926 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNB4P30926 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHRNB4P30926 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHRNB4P30926 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.98■□□□□ 0.79
CHRNB4P30926 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.98■□□□□ 0.79
CHRNB4P30926 pRNA.6-201ENST00000610482 90 ntBASIC19.98■□□□□ 0.79
CHRNB4P30926 pRNA.5-201ENST00000612139 90 ntBASIC19.98■□□□□ 0.79
CHRNB4P30926 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNB4P30926 pRNA.11-201ENST00000618423 90 ntBASIC19.98■□□□□ 0.79
CHRNB4P30926 pRNA.13-201ENST00000619112 90 ntBASIC19.98■□□□□ 0.79
CHRNB4P30926 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHRNB4P30926 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNB4P30926 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNB4P30926 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CHRNB4P30926 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNB4P30926 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNB4P30926 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNB4P30926 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNB4P30926 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNB4P30926 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNB4P30926 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNB4P30926 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHRNB4P30926 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNB4P30926 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNB4P30926 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CHRNB4P30926 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNB4P30926 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CHRNB4P30926 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNB4P30926 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNB4P30926 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNB4P30926 AC034268.1-201ENST00000441047 882 ntBASIC19.95■□□□□ 0.78
CHRNB4P30926 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHRNB4P30926 AC145676.1-201ENST00000514988 2004 ntBASIC19.95■□□□□ 0.78
CHRNB4P30926 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNB4P30926 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNB4P30926 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNB4P30926 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHRNB4P30926 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNB4P30926 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNB4P30926 AC141586.4-201ENST00000624558 1573 ntBASIC19.94■□□□□ 0.78
CHRNB4P30926 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNB4P30926 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNB4P30926 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
CHRNB4P30926 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNB4P30926 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNB4P30926 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNB4P30926 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CHRNB4P30926 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.93■□□□□ 0.78
CHRNB4P30926 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNB4P30926 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNB4P30926 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNB4P30926 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNB4P30926 ALDH1A3-203ENST00000557963 1670 ntBASIC19.93■□□□□ 0.78
CHRNB4P30926 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNB4P30926 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CHRNB4P30926 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNB4P30926 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNB4P30926 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHRNB4P30926 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNB4P30926 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHRNB4P30926 YBX1P1-201ENST00000445822 960 ntBASIC19.92■□□□□ 0.78
CHRNB4P30926 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.92■□□□□ 0.78
CHRNB4P30926 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNB4P30926 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 HLA-L-211ENST00000482052 1765 ntBASIC19.92■□□□□ 0.78
CHRNB4P30926 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNB4P30926 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNB4P30926 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNB4P30926 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNB4P30926 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms