Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H1CP16403 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.26■□□□□ 0.83
HIST1H1CP16403 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1CP16403 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1CP16403 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H1CP16403 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1CP16403 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H1CP16403 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H1CP16403 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H1CP16403 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1CP16403 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H1CP16403 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1CP16403 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1CP16403 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
HIST1H1CP16403 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H1CP16403 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.23■□□□□ 0.83
HIST1H1CP16403 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.23■□□□□ 0.83
HIST1H1CP16403 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.23■□□□□ 0.83
HIST1H1CP16403 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIST1H1CP16403 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H1CP16403 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 AC004448.1-201ENST00000458332 883 ntBASIC20.22■□□□□ 0.83
HIST1H1CP16403 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HIST1H1CP16403 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H1CP16403 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H1CP16403 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H1CP16403 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H1CP16403 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H1CP16403 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H1CP16403 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
HIST1H1CP16403 AC079630.1-202ENST00000618127 1840 ntBASIC20.2■□□□□ 0.82
HIST1H1CP16403 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.2■□□□□ 0.82
HIST1H1CP16403 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H1CP16403 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H1CP16403 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H1CP16403 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H1CP16403 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H1CP16403 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H1CP16403 MIR4508-201ENST00000584178 70 ntBASIC20.19■□□□□ 0.82
HIST1H1CP16403 AC012354.3-201ENST00000623734 483 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms