Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TOMM40O96008 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.6■□□□□ 0.41
TOMM40O96008 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOMM40O96008 ATP5G2P3-201ENST00000429083 425 ntBASIC17.6■□□□□ 0.41
TOMM40O96008 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TOMM40O96008 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TOMM40O96008 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOMM40O96008 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.6■□□□□ 0.41
TOMM40O96008 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TOMM40O96008 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOMM40O96008 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TOMM40O96008 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.6■□□□□ 0.41
TOMM40O96008 SLC25A24-204ENST00000569674 2357 ntBASIC17.6■□□□□ 0.41
TOMM40O96008 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TOMM40O96008 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TOMM40O96008 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TOMM40O96008 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 KRT18P24-201ENST00000344739 1156 ntBASIC17.59■□□□□ 0.41
TOMM40O96008 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.59■□□□□ 0.41
TOMM40O96008 AC004987.1-201ENST00000428627 508 ntBASIC17.59■□□□□ 0.41
TOMM40O96008 THA1P-201ENST00000590384 1145 ntBASIC17.59■□□□□ 0.41
TOMM40O96008 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.59■□□□□ 0.41
TOMM40O96008 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.59■□□□□ 0.41
TOMM40O96008 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TOMM40O96008 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.59■□□□□ 0.41
TOMM40O96008 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOMM40O96008 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOMM40O96008 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TOMM40O96008 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOMM40O96008 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TOMM40O96008 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.58■□□□□ 0.4
TOMM40O96008 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TOMM40O96008 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TOMM40O96008 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TOMM40O96008 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TOMM40O96008 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.58■□□□□ 0.4
TOMM40O96008 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TOMM40O96008 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.57■□□□□ 0.4
TOMM40O96008 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.57■□□□□ 0.4
TOMM40O96008 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.57■□□□□ 0.4
TOMM40O96008 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
TOMM40O96008 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.57■□□□□ 0.4
TOMM40O96008 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TOMM40O96008 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOMM40O96008 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
TOMM40O96008 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TOMM40O96008 TSPY13P-201ENST00000338964 914 ntBASIC17.56■□□□□ 0.4
TOMM40O96008 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.56■□□□□ 0.4
TOMM40O96008 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 MIR4281-201ENST00000580852 62 ntBASIC17.56■□□□□ 0.4
TOMM40O96008 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TOMM40O96008 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.56■□□□□ 0.4
TOMM40O96008 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.55■□□□□ 0.4
TOMM40O96008 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 AF131216.4-201ENST00000638924 1588 ntBASIC17.55■□□□□ 0.4
TOMM40O96008 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.55■□□□□ 0.4
TOMM40O96008 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TOMM40O96008 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms