Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.39■□□□□ 0.53
SSSCA1O60232 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSSCA1O60232 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.38■□□□□ 0.53
SSSCA1O60232 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSSCA1O60232 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SSSCA1O60232 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SSSCA1O60232 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.38■□□□□ 0.53
SSSCA1O60232 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.38■□□□□ 0.53
SSSCA1O60232 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SSSCA1O60232 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSSCA1O60232 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.38■□□□□ 0.53
SSSCA1O60232 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SSSCA1O60232 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.37■□□□□ 0.53
SSSCA1O60232 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.37■□□□□ 0.53
SSSCA1O60232 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.37■□□□□ 0.53
SSSCA1O60232 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.37■□□□□ 0.53
SSSCA1O60232 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SSSCA1O60232 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSSCA1O60232 AC016575.1-201ENST00000607026 382 ntBASIC18.37■□□□□ 0.53
SSSCA1O60232 AL161729.1-201ENST00000604104 1402 ntBASIC18.37■□□□□ 0.53
SSSCA1O60232 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.37■□□□□ 0.53
SSSCA1O60232 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SSSCA1O60232 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSSCA1O60232 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSSCA1O60232 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSSCA1O60232 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSSCA1O60232 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSSCA1O60232 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SSSCA1O60232 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.36■□□□□ 0.53
SSSCA1O60232 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSSCA1O60232 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSSCA1O60232 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSSCA1O60232 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.35■□□□□ 0.53
SSSCA1O60232 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.35■□□□□ 0.53
SSSCA1O60232 ECEL1P2-201ENST00000461596 1295 ntBASIC18.35■□□□□ 0.53
SSSCA1O60232 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.35■□□□□ 0.53
SSSCA1O60232 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSSCA1O60232 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SSSCA1O60232 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SSSCA1O60232 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSSCA1O60232 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.34■□□□□ 0.53
SSSCA1O60232 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSSCA1O60232 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSSCA1O60232 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.34■□□□□ 0.53
SSSCA1O60232 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.34■□□□□ 0.53
SSSCA1O60232 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSSCA1O60232 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSSCA1O60232 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSSCA1O60232 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.34■□□□□ 0.53
SSSCA1O60232 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSSCA1O60232 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSSCA1O60232 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSSCA1O60232 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SSSCA1O60232 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSSCA1O60232 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SSSCA1O60232 AC242852.2-201ENST00000615738 1807 ntBASIC18.33■□□□□ 0.53
SSSCA1O60232 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SSSCA1O60232 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.33■□□□□ 0.52
SSSCA1O60232 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSSCA1O60232 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.33■□□□□ 0.52
SSSCA1O60232 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSSCA1O60232 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSSCA1O60232 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 AC090877.2-201ENST00000558441 1738 ntBASIC18.32■□□□□ 0.52
SSSCA1O60232 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.32■□□□□ 0.52
SSSCA1O60232 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SSSCA1O60232 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.32■□□□□ 0.52
SSSCA1O60232 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSSCA1O60232 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
SSSCA1O60232 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSSCA1O60232 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms