Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
NCK2O43639 DUX4L19-201ENST00000557448 1267 ntBASIC24.89■■□□□ 1.58
NCK2O43639 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
NCK2O43639 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NCK2O43639 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NCK2O43639 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
NCK2O43639 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NCK2O43639 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
NCK2O43639 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.88■■□□□ 1.57
NCK2O43639 AC068473.5-201ENST00000616428 2072 ntBASIC24.88■■□□□ 1.57
NCK2O43639 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
NCK2O43639 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
NCK2O43639 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
NCK2O43639 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
NCK2O43639 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NCK2O43639 AC141586.4-201ENST00000624558 1573 ntBASIC24.88■■□□□ 1.57
NCK2O43639 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NCK2O43639 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NCK2O43639 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NCK2O43639 SNX5-217ENST00000606557 1087 ntBASIC24.87■■□□□ 1.57
NCK2O43639 AL136967.2-201ENST00000623968 743 ntBASIC24.87■■□□□ 1.57
NCK2O43639 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NCK2O43639 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
NCK2O43639 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 ABCB10P4-201ENST00000566803 2184 ntBASIC24.86■■□□□ 1.57
NCK2O43639 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.86■■□□□ 1.57
NCK2O43639 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.86■■□□□ 1.57
NCK2O43639 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
NCK2O43639 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.86■■□□□ 1.57
NCK2O43639 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.85■■□□□ 1.57
NCK2O43639 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.85■■□□□ 1.57
NCK2O43639 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.85■■□□□ 1.57
NCK2O43639 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
NCK2O43639 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.85■■□□□ 1.57
NCK2O43639 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
NCK2O43639 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
NCK2O43639 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.85■■□□□ 1.57
NCK2O43639 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NCK2O43639 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NCK2O43639 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
NCK2O43639 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
NCK2O43639 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.84■■□□□ 1.57
NCK2O43639 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NCK2O43639 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.84■■□□□ 1.57
NCK2O43639 AC097381.1-201ENST00000429019 1296 ntBASIC24.84■■□□□ 1.57
NCK2O43639 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.84■■□□□ 1.57
NCK2O43639 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
NCK2O43639 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NCK2O43639 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.83■■□□□ 1.57
NCK2O43639 AC004448.1-201ENST00000458332 883 ntBASIC24.83■■□□□ 1.57
NCK2O43639 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.83■■□□□ 1.57
NCK2O43639 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
NCK2O43639 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NCK2O43639 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NCK2O43639 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
NCK2O43639 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.82■■□□□ 1.56
NCK2O43639 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.82■■□□□ 1.56
NCK2O43639 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.82■■□□□ 1.56
NCK2O43639 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
NCK2O43639 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.82■■□□□ 1.56
NCK2O43639 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.81■■□□□ 1.56
NCK2O43639 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
NCK2O43639 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
NCK2O43639 MIR939-201ENST00000401314 82 ntBASIC24.81■■□□□ 1.56
NCK2O43639 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 AF213884.3-201ENST00000563833 479 ntBASIC24.81■■□□□ 1.56
NCK2O43639 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.81■■□□□ 1.56
NCK2O43639 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCK2O43639 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NCK2O43639 AC091305.1-201ENST00000479476 895 ntBASIC24.8■■□□□ 1.56
NCK2O43639 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
NCK2O43639 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.8■■□□□ 1.56
NCK2O43639 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
NCK2O43639 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NCK2O43639 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms