Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
A0A1W2PRF3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
A0A1W2PRF3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.49■□□□□ 0.55
A0A1W2PRF3 ABCB10P4-201ENST00000566803 2184 ntBASIC18.49■□□□□ 0.55
A0A1W2PRF3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
A0A1W2PRF3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
A0A1W2PRF3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
A0A1W2PRF3 AC004812.2-201ENST00000611079 2094 ntBASIC18.48■□□□□ 0.55
A0A1W2PRF3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
A0A1W2PRF3 AC096631.2-201ENST00000436136 790 ntBASIC18.48■□□□□ 0.55
A0A1W2PRF3 SRD5A1P1-201ENST00000442297 786 ntBASIC18.48■□□□□ 0.55
A0A1W2PRF3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
A0A1W2PRF3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
A0A1W2PRF3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 LINC00543-201ENST00000567234 1845 ntBASIC18.47■□□□□ 0.55
A0A1W2PRF3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.47■□□□□ 0.55
A0A1W2PRF3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.47■□□□□ 0.55
A0A1W2PRF3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.47■□□□□ 0.55
A0A1W2PRF3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
A0A1W2PRF3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 AC009102.2-201ENST00000606772 1639 ntBASIC18.46■□□□□ 0.55
A0A1W2PRF3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
A0A1W2PRF3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
A0A1W2PRF3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
A0A1W2PRF3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
A0A1W2PRF3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
A0A1W2PRF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
A0A1W2PRF3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.43■□□□□ 0.54
A0A1W2PRF3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.43■□□□□ 0.54
A0A1W2PRF3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.43■□□□□ 0.54
A0A1W2PRF3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
A0A1W2PRF3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
A0A1W2PRF3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
A0A1W2PRF3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.42■□□□□ 0.54
A0A1W2PRF3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.42■□□□□ 0.54
A0A1W2PRF3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.42■□□□□ 0.54
A0A1W2PRF3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.42■□□□□ 0.54
A0A1W2PRF3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
A0A1W2PRF3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms