Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 AC129492.7-201ENST00000622992 756 ntBASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV21A0A0B4J279 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV21A0A0B4J279 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 AC139795.1-202ENST00000500444 432 ntBASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 U85056.1-201ENST00000616429 682 ntBASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 AC131274.2-201ENST00000580697 1507 ntBASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV21A0A0B4J279 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 AC019171.1-201ENST00000601251 1056 ntBASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV21A0A0B4J279 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV21A0A0B4J279 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV21A0A0B4J279 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms