Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 MIR3665-201ENST00000578708 105 ntBASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-2A0A0B4J235 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV13-2A0A0B4J235 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 SLC25A24-204ENST00000569674 2357 ntBASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-2A0A0B4J235 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 AL137060.1-201ENST00000618151 2648 ntBASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-2A0A0B4J235 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-2A0A0B4J235 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAV13-2A0A0B4J235 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV13-2A0A0B4J235 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms