Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AL356740.2-201ENST00000601559 647 ntBASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 AL136116.3-201ENST00000402907 1138 ntBASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 MIR4466-201ENST00000606121 54 ntBASIC20.47■□□□□ 0.87
TNFSF12-TNFSF13A0A0A6YY99 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms