Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TBC1D3J-201ENST00000620719 1426 ntBASIC14.34□□□□□ -0.11
SPASTQ9UBP0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 XBP1P1-201ENST00000436573 652 ntBASIC14.34□□□□□ -0.11
SPASTQ9UBP0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 RN7SL258P-201ENST00000478664 300 ntBASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TMBIM7P-202ENST00000641474 1516 ntBASIC14.34□□□□□ -0.11
SPASTQ9UBP0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 AHCYP4-201ENST00000419201 1315 ntBASIC14.34□□□□□ -0.11
SPASTQ9UBP0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 AC097359.2-201ENST00000604992 2389 ntBASIC14.33□□□□□ -0.11
SPASTQ9UBP0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPASTQ9UBP0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 FXNP2-201ENST00000411625 547 ntBASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 MPRIPP1-201ENST00000452433 1089 ntBASIC14.33□□□□□ -0.12
SPASTQ9UBP0 CEP164P1-201ENST00000455142 418 ntBASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC008723.1-201ENST00000506922 207 ntBASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPASTQ9UBP0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms