Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 AC008620.2-201ENST00000510294 1569 ntBASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 AC140479.7-201ENST00000636301 2332 ntBASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 CFL1P6-201ENST00000400899 494 ntBASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNRC6CQ9HCJ0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC6CQ9HCJ0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNRC6CQ9HCJ0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TNRC6CQ9HCJ0 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 MIR339-201ENST00000362153 94 ntBASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 PSME2P2-201ENST00000453033 700 ntBASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 RN7SL684P-201ENST00000465665 294 ntBASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 FAM226B-201ENST00000602508 1490 ntBASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 AL390755.1-201ENST00000623716 2027 ntBASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNRC6CQ9HCJ0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 KRT8P42-201ENST00000405771 1399 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 BX088651.3-201ENST00000418155 352 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 METTL7AP1-201ENST00000547343 496 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AC087072.1-201ENST00000603727 421 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 TNRC18P2-201ENST00000417666 2714 ntBASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TNRC6CQ9HCJ0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms