Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FYCO1Q9BQS8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 HLA-DMA-202ENST00000395303 1007 ntBASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 SNU13-204ENST00000402458 462 ntTSL 3 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 BAK1P2-201ENST00000532665 631 ntBASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FYCO1Q9BQS8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 AC006548.2-201ENST00000605217 529 ntBASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 AL157996.1-201ENST00000624684 2299 ntBASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FYCO1Q9BQS8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 SEPHS2P1-201ENST00000511618 1162 ntBASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 KRT18P8-201ENST00000581937 1246 ntBASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 AC113385.2-201ENST00000614465 762 ntBASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 AC007191.1-201ENST00000623179 2995 ntBASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FYCO1Q9BQS8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 KRT8P42-201ENST00000405771 1399 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 OR51A9P-201ENST00000422578 911 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 AL929302.1-201ENST00000426556 871 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 AC103563.1-201ENST00000429316 123 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 CISD2-202ENST00000503643 808 ntTSL 2 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 HNRNPA1P56-201ENST00000505767 954 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 KNOP1P1-201ENST00000542108 989 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 AC068831.5-201ENST00000557387 328 ntBASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.57■■□□□ 1.04
FYCO1Q9BQS8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms