Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC025183.3-201ENST00000623526 1482 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 ELK2AP-201ENST00000392510 1007 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 RPSAP15-201ENST00000448168 861 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 RN7SL11P-201ENST00000471305 293 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 MIR3619-201ENST00000579667 83 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 AL021707.6-201ENST00000609212 491 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 AC135782.3-201ENST00000562782 2105 ntBASIC16.12■□□□□ 0.17
TNFRSF25Q93038 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TNFRSF25Q93038 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 MIR645-201ENST00000385283 94 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 SNORA50C-201ENST00000408535 133 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AC006987.1-201ENST00000413610 527 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AC012618.1-201ENST00000461223 412 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AC026803.1-201ENST00000569130 274 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 SNORA50.1-201ENST00000628590 135 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 AC073548.1-201ENST00000624088 1882 ntBASIC16.11■□□□□ 0.17
TNFRSF25Q93038 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.11■□□□□ 0.17
TNFRSF25Q93038 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TNFRSF25Q93038 PPP1R2P4-201ENST00000424051 595 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms