Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 BCL2L12P1-201ENST00000508390 733 ntBASIC17.01■□□□□ 0.31
SNED1Q8TER0 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.01■□□□□ 0.31
SNED1Q8TER0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNED1Q8TER0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SNED1Q8TER0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 RNA5SP491-201ENST00000362936 118 ntBASIC17■□□□□ 0.31
SNED1Q8TER0 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 RNU1-80P-201ENST00000459500 161 ntBASIC17■□□□□ 0.31
SNED1Q8TER0 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17■□□□□ 0.31
SNED1Q8TER0 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17■□□□□ 0.31
SNED1Q8TER0 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17■□□□□ 0.31
SNED1Q8TER0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 RN7SL832P-201ENST00000607781 1756 ntBASIC17■□□□□ 0.31
SNED1Q8TER0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SNED1Q8TER0 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SNED1Q8TER0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNED1Q8TER0 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SNED1Q8TER0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SNED1Q8TER0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 PHBP10-201ENST00000416467 784 ntBASIC16.99■□□□□ 0.31
SNED1Q8TER0 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 MIR4254-201ENST00000581063 76 ntBASIC16.99■□□□□ 0.31
SNED1Q8TER0 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.99■□□□□ 0.31
SNED1Q8TER0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNED1Q8TER0 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms