Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 AP000346.4-201ENST00000614827 381 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SMARCC2Q8TAQ2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 AC015909.5-201ENST00000624336 2266 ntBASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.77■□□□□ 0.27
SMARCC2Q8TAQ2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 AC005077.2-201ENST00000449786 690 ntBASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 KRT18P15-201ENST00000458108 1291 ntBASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 MARK2P5-201ENST00000507649 634 ntBASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 SNORD3B-2-202ENST00000571722 791 ntBASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 AC026740.1-201ENST00000607068 791 ntBASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMARCC2Q8TAQ2 CCT8L1P-201ENST00000465400 1674 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 AC091544.8-201ENST00000619490 361 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms