Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NAP1L6-202ENST00000641404 1222 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 AC005562.1-201ENST00000583030 3219 ntBASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CLDND2Q8NHS1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 FAM90A7P-201ENST00000382628 1395 ntBASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 FAM90A23P-201ENST00000400136 1395 ntBASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CLDND2Q8NHS1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 CR383656.2-201ENST00000548656 2254 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AC007274.2-201ENST00000421675 662 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 ISCA2P1-201ENST00000425548 448 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AL157407.1-201ENST00000435784 904 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 AC134698.3-201ENST00000523880 214 ntBASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CLDND2Q8NHS1 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms