Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BEST4Q8NFU0 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 AP003969.2-201ENST00000623739 2275 ntBASIC12.46□□□□□ -0.42
BEST4Q8NFU0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
BEST4Q8NFU0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 UPF3AP3-201ENST00000420996 769 ntBASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AC107890.1-201ENST00000422478 521 ntBASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AL445250.1-201ENST00000641671 2259 ntBASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 AC100757.3-201ENST00000622361 1406 ntBASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
BEST4Q8NFU0 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PCDHB17P-202ENST00000623466 3066 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 TRIM80P-201ENST00000455685 2848 ntBASIC12.44□□□□□ -0.42
BEST4Q8NFU0 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
BEST4Q8NFU0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms