Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 OR2I1P-208ENST00000641137 4948 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 PIN1P1-201ENST00000412108 996 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 ALG3P1-201ENST00000508806 1114 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 RN7SL48P-201ENST00000579283 293 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 CTBP2P3-201ENST00000585629 1255 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 BX088702.1-201ENST00000610784 235 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 WFDC1-204ENST00000613603 549 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.71□□□□□ -0.37
DNAAF1Q8NEP3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
DNAAF1Q8NEP3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DNAAF1Q8NEP3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms