Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.76□□□□□ -0.05
CDKL3Q8IVW4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AC099336.1-201ENST00000417053 1171 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 HLA-V-201ENST00000429037 534 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 U91328.1-201ENST00000437528 223 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AL160314.3-201ENST00000556041 767 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AC140658.4-201ENST00000561990 352 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 DUX4L45-201ENST00000566406 1057 ntBASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDKL3Q8IVW4 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ACA64.2-201ENST00000459014 129 ntBASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 PGAM1P5-201ENST00000548011 764 ntBASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.74□□□□□ -0.05
CDKL3Q8IVW4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms