Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 AL390755.1-201ENST00000623716 2027 ntBASIC15.26■□□□□ 0.03
RNF135Q8IUD6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF135Q8IUD6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 RN7SKP230-201ENST00000365642 335 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 HLA-DMA-203ENST00000395305 777 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 FAM86B3P-203ENST00000523992 854 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 MIR3188-201ENST00000583494 85 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AC005041.3-201ENST00000606287 649 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AC005786.4-201ENST00000623369 682 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AL451007.2-201ENST00000632004 563 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 KRT8P31-201ENST00000504812 1408 ntBASIC15.25■□□□□ 0.03
RNF135Q8IUD6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF135Q8IUD6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AQP7P5-201ENST00000428759 1049 ntBASIC15.24■□□□□ 0.03
RNF135Q8IUD6 AL157407.1-201ENST00000435784 904 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms