Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AL451086.1-201ENST00000605596 223 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC087392.5-201ENST00000612517 489 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC084781.1-201ENST00000613737 656 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FAM45BP-202ENST00000592932 1624 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 GCNT6-201ENST00000379591 934 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AL627389.1-201ENST00000413508 1182 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AC012454.1-201ENST00000443948 995 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AC079112.1-201ENST00000454972 939 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 CAB39P1-201ENST00000502277 460 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 AP001184.1-201ENST00000637936 376 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 LINC01815-202ENST00000641468 1409 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VARS2Q5ST30 CICP24-201ENST00000605464 2705 ntBASIC15.22■□□□□ 0.03
VARS2Q5ST30 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
VARS2Q5ST30 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 MIR1227-201ENST00000408484 88 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 RPL18AP8-201ENST00000486071 528 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 MTND4LP31-201ENST00000514859 294 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms