Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MST1P2-201ENST00000457982 2291 ntBASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
HERC4Q5GLZ8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 MBLAC2-202ENST00000514906 1936 ntBASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 RN7SL574P-201ENST00000581512 297 ntBASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HERC4Q5GLZ8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 CYP4F23P-201ENST00000593402 1579 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 TUBB8P4-201ENST00000511806 1324 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 RPL18P13-201ENST00000478088 569 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AC006122.1-201ENST00000493323 440 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AC008805.1-201ENST00000590892 364 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AL023803.2-201ENST00000620080 638 ntBASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.05■□□□□ 0.16
HERC4Q5GLZ8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HERC4Q5GLZ8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms