Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN20P56880 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.22□□□□□ -0.29
CLDN20P56880 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 AC244093.1-201ENST00000610837 814 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 AC022748.3-201ENST00000621828 275 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLDN20P56880 AC114271.1-201ENST00000612689 2813 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN20P56880 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLDN20P56880 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN20P56880 AC004899.1-201ENST00000424687 1714 ntBASIC13.22□□□□□ -0.29
CLDN20P56880 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 KRT8P28-201ENST00000433288 1390 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 AL008718.2-201ENST00000609206 1313 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 NKAIN1P1-201ENST00000435754 582 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN20P56880 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.21□□□□□ -0.29
CLDN20P56880 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 TUBB8P8-201ENST00000458717 1058 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 AC044849.1-201ENST00000519737 1188 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN20P56880 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN20P56880 MIR3615-201ENST00000581999 87 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 BNIP3P13-201ENST00000599968 566 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 AL451050.2-201ENST00000606967 682 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 MIR6787-201ENST00000616675 61 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CLDN20P56880 Z98259.2-201ENST00000641583 609 ntBASIC13.21□□□□□ -0.29
CLDN20P56880 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN20P56880 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CLDN20P56880 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN20P56880 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 BEND3P3-201ENST00000611030 2440 ntBASIC13.21□□□□□ -0.3
CLDN20P56880 AC004241.5-201ENST00000623870 2448 ntBASIC13.21□□□□□ -0.3
CLDN20P56880 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CLDN20P56880 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN20P56880 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
CLDN20P56880 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CLDN20P56880 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN20P56880 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
CLDN20P56880 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDN20P56880 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 KHSRPP1-201ENST00000427983 1768 ntBASIC13.2□□□□□ -0.3
CLDN20P56880 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN20P56880 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN20P56880 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN20P56880 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms