Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.64□□□□□ -0.23
CASP9P55211 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.64□□□□□ -0.23
CASP9P55211 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.64□□□□□ -0.23
CASP9P55211 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 AL136301.1-201ENST00000615830 422 ntBASIC13.64□□□□□ -0.23
CASP9P55211 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 AC027601.3-201ENST00000622907 509 ntBASIC13.64□□□□□ -0.23
CASP9P55211 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.64□□□□□ -0.23
CASP9P55211 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 AC064801.2-201ENST00000625052 1303 ntBASIC13.64□□□□□ -0.23
CASP9P55211 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CASP9P55211 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CASP9P55211 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.63□□□□□ -0.23
CASP9P55211 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CASP9P55211 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CASP9P55211 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.63□□□□□ -0.23
CASP9P55211 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.63□□□□□ -0.23
CASP9P55211 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 CNN2P8-201ENST00000421872 913 ntBASIC13.63□□□□□ -0.23
CASP9P55211 AL161932.2-201ENST00000435436 679 ntBASIC13.63□□□□□ -0.23
CASP9P55211 TMEM198B-204ENST00000484016 896 ntBASIC13.63□□□□□ -0.23
CASP9P55211 IGHV3-71-201ENST00000523324 359 ntBASIC13.63□□□□□ -0.23
CASP9P55211 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CASP9P55211 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.63□□□□□ -0.23
CASP9P55211 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.63□□□□□ -0.23
CASP9P55211 AC005586.2-201ENST00000563946 837 ntBASIC13.63□□□□□ -0.23
CASP9P55211 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CASP9P55211 PPY2P-201ENST00000582808 702 ntBASIC13.63□□□□□ -0.23
CASP9P55211 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.63□□□□□ -0.23
CASP9P55211 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.63□□□□□ -0.23
CASP9P55211 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.63□□□□□ -0.23
CASP9P55211 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CASP9P55211 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms