Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 OR2K2-202ENST00000374428 1038 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 AC007274.2-201ENST00000421675 662 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 AC008723.1-201ENST00000506922 207 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 AC114947.1-202ENST00000514136 344 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 AC245884.6-201ENST00000515672 1067 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.61■□□□□ 0.09
NCKAP1LP55160 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
NCKAP1LP55160 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCKAP1LP55160 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 LINC02486-201ENST00000604157 3000 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 RCC2P1-201ENST00000452257 1476 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 BX679664.3-201ENST00000414070 555 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AC113935.1-201ENST00000471722 555 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 MIR3677-201ENST00000578964 60 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AL021578.1-201ENST00000613646 709 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 KRT18P9-201ENST00000604826 1300 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 AC068760.1-201ENST00000493579 1953 ntBASIC15.6■□□□□ 0.09
NCKAP1LP55160 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NCKAP1LP55160 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCKAP1LP55160 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms