Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSR4P51571 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSR4P51571 LINC01815-202ENST00000641468 1409 ntBASIC13.13□□□□□ -0.31
SSR4P51571 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSR4P51571 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSR4P51571 LINC00115-201ENST00000473798 1317 ntBASIC13.13□□□□□ -0.31
SSR4P51571 TUBB8P4-201ENST00000511806 1324 ntBASIC13.13□□□□□ -0.31
SSR4P51571 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.13□□□□□ -0.31
SSR4P51571 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSR4P51571 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 AC012617.1-204ENST00000586340 2305 ntBASIC13.12□□□□□ -0.31
SSR4P51571 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 AC007952.5-201ENST00000572818 1486 ntBASIC13.12□□□□□ -0.31
SSR4P51571 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 BX640514.1-201ENST00000583223 1918 ntBASIC13.12□□□□□ -0.31
SSR4P51571 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 AC091046.1-201ENST00000331871 207 ntBASIC13.12□□□□□ -0.31
SSR4P51571 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.12□□□□□ -0.31
SSR4P51571 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 TMEM198B-204ENST00000484016 896 ntBASIC13.12□□□□□ -0.31
SSR4P51571 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.12□□□□□ -0.31
SSR4P51571 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.12□□□□□ -0.31
SSR4P51571 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SSR4P51571 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.12□□□□□ -0.31
SSR4P51571 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 AL596257.1-201ENST00000641463 2694 ntBASIC13.12□□□□□ -0.31
SSR4P51571 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSR4P51571 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.12□□□□□ -0.31
SSR4P51571 AL590824.1-201ENST00000403828 1349 ntBASIC13.12□□□□□ -0.31
SSR4P51571 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SSR4P51571 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 AC103592.1-201ENST00000394513 664 ntBASIC13.11□□□□□ -0.31
SSR4P51571 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.11□□□□□ -0.31
SSR4P51571 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.11□□□□□ -0.31
SSR4P51571 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.11□□□□□ -0.31
SSR4P51571 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.11□□□□□ -0.31
SSR4P51571 FGFR3P1-201ENST00000449999 601 ntBASIC13.11□□□□□ -0.31
SSR4P51571 FTH1P22-201ENST00000456305 520 ntBASIC13.11□□□□□ -0.31
SSR4P51571 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.11□□□□□ -0.31
SSR4P51571 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.11□□□□□ -0.31
SSR4P51571 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SSR4P51571 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.11□□□□□ -0.31
SSR4P51571 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.11□□□□□ -0.31
SSR4P51571 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms