Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLK1P49759 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLK1P49759 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 AC114271.1-201ENST00000612689 2813 ntBASIC13.62□□□□□ -0.23
CLK1P49759 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 AL354702.1-201ENST00000442006 1960 ntBASIC13.62□□□□□ -0.23
CLK1P49759 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 TLE1P1-201ENST00000422965 589 ntBASIC13.61□□□□□ -0.23
CLK1P49759 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 AP001889.1-201ENST00000525414 633 ntBASIC13.61□□□□□ -0.23
CLK1P49759 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.61□□□□□ -0.23
CLK1P49759 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CLK1P49759 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.61□□□□□ -0.23
CLK1P49759 BTNL10-201ENST00000595971 695 ntBASIC13.61□□□□□ -0.23
CLK1P49759 AC233724.13-201ENST00000598383 410 ntBASIC13.61□□□□□ -0.23
CLK1P49759 AC145423.3-201ENST00000615987 467 ntBASIC13.61□□□□□ -0.23
CLK1P49759 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 AC073957.3-201ENST00000609998 6758 ntBASIC13.61□□□□□ -0.23
CLK1P49759 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLK1P49759 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
CLK1P49759 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 AC023794.5-201ENST00000564380 2157 ntBASIC13.61□□□□□ -0.23
CLK1P49759 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLK1P49759 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 TCAM1P-207ENST00000485295 1537 ntBASIC13.6□□□□□ -0.23
CLK1P49759 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLK1P49759 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 AC090505.1-201ENST00000430515 1834 ntBASIC13.6□□□□□ -0.23
CLK1P49759 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CLK1P49759 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CLK1P49759 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.6□□□□□ -0.23
CLK1P49759 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLK1P49759 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.6□□□□□ -0.23
CLK1P49759 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CLK1P49759 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms