Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.98□□□□□ -0.17
GDF5P43026 AC008805.1-201ENST00000590892 364 ntBASIC13.98□□□□□ -0.17
GDF5P43026 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GDF5P43026 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF5P43026 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF5P43026 BAP1-211ENST00000615113 489 ntBASIC13.98□□□□□ -0.17
GDF5P43026 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.98□□□□□ -0.17
GDF5P43026 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GDF5P43026 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GDF5P43026 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
GDF5P43026 MEX3B-202ENST00000558133 4333 ntBASIC13.98□□□□□ -0.17
GDF5P43026 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
GDF5P43026 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GDF5P43026 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 CCT8L1P-201ENST00000465400 1674 ntBASIC13.98□□□□□ -0.17
GDF5P43026 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF5P43026 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDF5P43026 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF5P43026 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDF5P43026 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF5P43026 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDF5P43026 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 BTBD6P1-201ENST00000412176 1267 ntBASIC13.97□□□□□ -0.17
GDF5P43026 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.97□□□□□ -0.17
GDF5P43026 FAM86HP-204ENST00000513466 959 ntBASIC13.97□□□□□ -0.17
GDF5P43026 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 PGAM1P5-201ENST00000548011 764 ntBASIC13.97□□□□□ -0.17
GDF5P43026 AL583810.1-201ENST00000553344 1045 ntBASIC13.97□□□□□ -0.17
GDF5P43026 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.97□□□□□ -0.17
GDF5P43026 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.97□□□□□ -0.17
GDF5P43026 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.97□□□□□ -0.17
GDF5P43026 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 AC133540.1-201ENST00000620845 1019 ntBASIC13.97□□□□□ -0.17
GDF5P43026 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.97□□□□□ -0.17
GDF5P43026 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF5P43026 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
GDF5P43026 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GDF5P43026 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF5P43026 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDF5P43026 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
GDF5P43026 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF5P43026 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.96□□□□□ -0.17
GDF5P43026 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.96□□□□□ -0.17
GDF5P43026 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms