Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 AP001102.1-201ENST00000528959 409 ntBASIC15.44■□□□□ 0.06
HTTP42858 AL031768.1-201ENST00000606542 701 ntBASIC15.44■□□□□ 0.06
HTTP42858 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
HTTP42858 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AC022532.1-201ENST00000624563 1728 ntBASIC15.44■□□□□ 0.06
HTTP42858 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AL031577.1-201ENST00000339867 399 ntBASIC15.44■□□□□ 0.06
HTTP42858 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.44■□□□□ 0.06
HTTP42858 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 AC112694.1-202ENST00000540985 943 ntBASIC15.44■□□□□ 0.06
HTTP42858 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
HTTP42858 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 AC124319.4-201ENST00000622931 2161 ntBASIC15.44■□□□□ 0.06
HTTP42858 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC15.44■□□□□ 0.06
HTTP42858 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
HTTP42858 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 CLK2P1-201ENST00000416636 1294 ntBASIC15.43■□□□□ 0.06
HTTP42858 AC012513.2-201ENST00000441511 1137 ntBASIC15.43■□□□□ 0.06
HTTP42858 AC008267.3-201ENST00000448776 712 ntBASIC15.43■□□□□ 0.06
HTTP42858 AC007622.1-201ENST00000488371 535 ntBASIC15.43■□□□□ 0.06
HTTP42858 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HTTP42858 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 TUBA3GP-201ENST00000410028 1325 ntBASIC15.43■□□□□ 0.06
HTTP42858 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 AC144831.1-201ENST00000573312 2656 ntBASIC15.43■□□□□ 0.06
HTTP42858 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC15.43■□□□□ 0.06
HTTP42858 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC15.43■□□□□ 0.06
HTTP42858 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HTTP42858 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.43■□□□□ 0.06
HTTP42858 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 AP000437.1-201ENST00000624057 2085 ntBASIC15.43■□□□□ 0.06
HTTP42858 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.43■□□□□ 0.06
HTTP42858 FTH1-205ENST00000529631 507 ntTSL 4 BASIC15.43■□□□□ 0.06
HTTP42858 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.43■□□□□ 0.06
HTTP42858 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HTTP42858 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HTTP42858 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTTP42858 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.42■□□□□ 0.06
HTTP42858 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTTP42858 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.42■□□□□ 0.06
HTTP42858 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTTP42858 AC104115.1-201ENST00000484005 623 ntBASIC15.42■□□□□ 0.06
HTTP42858 ALG10-202ENST00000538927 571 ntTSL 5 BASIC15.42■□□□□ 0.06
HTTP42858 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HTTP42858 RN7SL134P-201ENST00000579756 303 ntBASIC15.42■□□□□ 0.06
HTTP42858 AC091691.1-201ENST00000583587 1018 ntBASIC15.42■□□□□ 0.06
HTTP42858 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC15.42■□□□□ 0.06
HTTP42858 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.42■□□□□ 0.06
HTTP42858 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HTTP42858 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms