Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 AC104982.3-201ENST00000581995 514 ntBASIC14.85□□□□□ -0.03
CD48P09326 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.85□□□□□ -0.03
CD48P09326 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.85□□□□□ -0.03
CD48P09326 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 AL591471.1-201ENST00000621855 229 ntBASIC14.85□□□□□ -0.03
CD48P09326 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.85□□□□□ -0.03
CD48P09326 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 DGCR9-201ENST00000609630 2415 ntBASIC14.85□□□□□ -0.03
CD48P09326 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
CD48P09326 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CD48P09326 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD48P09326 AL122018.1-201ENST00000446607 2310 ntBASIC14.84□□□□□ -0.03
CD48P09326 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CD48P09326 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CD48P09326 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD48P09326 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD48P09326 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 AC007952.5-201ENST00000572818 1486 ntBASIC14.84□□□□□ -0.03
CD48P09326 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.84□□□□□ -0.03
CD48P09326 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.84□□□□□ -0.03
CD48P09326 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.84□□□□□ -0.03
CD48P09326 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.84□□□□□ -0.03
CD48P09326 AC007663.3-201ENST00000609632 465 ntBASIC14.84□□□□□ -0.03
CD48P09326 AP000346.4-201ENST00000614827 381 ntBASIC14.84□□□□□ -0.03
CD48P09326 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.84□□□□□ -0.03
CD48P09326 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 LINC00115-201ENST00000473798 1317 ntBASIC14.84□□□□□ -0.03
CD48P09326 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.84□□□□□ -0.03
CD48P09326 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.84□□□□□ -0.03
CD48P09326 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD48P09326 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.83□□□□□ -0.03
CD48P09326 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD48P09326 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CD48P09326 GK-202ENST00000378941 458 ntTSL 3 BASIC14.83□□□□□ -0.04
CD48P09326 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.83□□□□□ -0.04
CD48P09326 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.83□□□□□ -0.04
CD48P09326 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms