Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15□□□□□ -0.01
RB1P06400 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
RB1P06400 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RB1P06400 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 AC073347.1-201ENST00000421633 2643 ntBASIC14.99□□□□□ -0.01
RB1P06400 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RB1P06400 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 AL596257.1-201ENST00000641463 2694 ntBASIC14.99□□□□□ -0.01
RB1P06400 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
RB1P06400 RN7SL147P-201ENST00000487345 298 ntBASIC14.99□□□□□ -0.01
RB1P06400 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 BAK1P2-201ENST00000532665 631 ntBASIC14.99□□□□□ -0.01
RB1P06400 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.99□□□□□ -0.01
RB1P06400 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.99□□□□□ -0.01
RB1P06400 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.99□□□□□ -0.01
RB1P06400 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.99□□□□□ -0.01
RB1P06400 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.99□□□□□ -0.01
RB1P06400 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.99□□□□□ -0.01
RB1P06400 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RB1P06400 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.99□□□□□ -0.01
RB1P06400 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.99□□□□□ -0.01
RB1P06400 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.99□□□□□ -0.01
RB1P06400 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RB1P06400 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RB1P06400 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RB1P06400 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RB1P06400 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.98□□□□□ -0.01
RB1P06400 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.98□□□□□ -0.01
RB1P06400 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.98□□□□□ -0.01
RB1P06400 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 KRT18P15-201ENST00000458108 1291 ntBASIC14.98□□□□□ -0.01
RB1P06400 BCRP4-201ENST00000506079 804 ntBASIC14.98□□□□□ -0.01
RB1P06400 COQ10BP2-201ENST00000513804 724 ntBASIC14.98□□□□□ -0.01
RB1P06400 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.98□□□□□ -0.01
RB1P06400 AC023968.2-201ENST00000560593 1049 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms