Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 AC009093.10-201ENST00000641956 1442 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NPIPA2E9PIF3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 KRT8P28-201ENST00000433288 1390 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MPRIPP1-201ENST00000452433 1089 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MIR4754-201ENST00000582477 89 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MIR6074-201ENST00000612054 107 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MIR6769A-201ENST00000617340 73 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 AC128714.1-201ENST00000637035 887 ntBASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NPIPA2E9PIF3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA2E9PIF3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms