Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 FAM95B1-212ENST00000592873 4692 ntBASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AL596442.2-201ENST00000610240 980 ntBASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 AC073592.8-201ENST00000624126 511 ntBASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RPH3ALQ9UNE2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RPH3ALQ9UNE2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
RPH3ALQ9UNE2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.33□□□□□ -0.59
RPH3ALQ9UNE2 AC134407.3-201ENST00000624035 2139 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AL845472.1-202ENST00000624675 4080 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 MIR574-201ENST00000385209 96 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AL022342.1-201ENST00000400363 863 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC125807.1-201ENST00000483097 614 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC027369.6-201ENST00000525520 931 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 MYADML-201ENST00000474610 2147 ntBASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RPH3ALQ9UNE2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms