Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 DBET-201ENST00000630918 3363 ntBASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SYNPO2Q9UMS6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AC106881.1-201ENST00000605849 3329 ntBASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 HSPA7-201ENST00000445535 1927 ntBASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AL132994.1-201ENST00000554098 400 ntBASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 AC025271.4-201ENST00000621477 1726 ntBASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SYNPO2Q9UMS6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 FAM45BP-202ENST00000592932 1624 ntBASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 AC005912.2-201ENST00000619492 2400 ntBASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 AC007279.1-201ENST00000448547 837 ntBASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SYNPO2Q9UMS6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 AC117503.4-201ENST00000623229 1418 ntBASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SYNPO2Q9UMS6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms