Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.6□□□□□ -0.07
HACD3Q9P035 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HACD3Q9P035 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.59□□□□□ -0.07
HACD3Q9P035 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 ST13P19-201ENST00000442505 1124 ntBASIC14.59□□□□□ -0.07
HACD3Q9P035 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.59□□□□□ -0.07
HACD3Q9P035 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 AC104982.3-201ENST00000581995 514 ntBASIC14.59□□□□□ -0.07
HACD3Q9P035 AC005962.1-201ENST00000584100 773 ntBASIC14.59□□□□□ -0.07
HACD3Q9P035 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.59□□□□□ -0.07
HACD3Q9P035 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HACD3Q9P035 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HACD3Q9P035 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HACD3Q9P035 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HACD3Q9P035 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.58□□□□□ -0.07
HACD3Q9P035 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HACD3Q9P035 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HACD3Q9P035 AC144522.1-201ENST00000625111 1658 ntBASIC14.58□□□□□ -0.07
HACD3Q9P035 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.58□□□□□ -0.07
HACD3Q9P035 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.58□□□□□ -0.08
HACD3Q9P035 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HACD3Q9P035 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HACD3Q9P035 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.58□□□□□ -0.08
HACD3Q9P035 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HACD3Q9P035 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.58□□□□□ -0.08
HACD3Q9P035 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms